First, it uses screwy tense (maybe based upon “there was no ‘then’ prior to the existence of time-space”?) and unnecessary commas that divide thoughts where they shouldn’t be divided.
Second, counterfactuals are conditional statements in which the “if” is about something that’s not true, and the “then” is the way things would be as opposed to how they actually are ... all according to the speaker/writer, of course. “If Martin Luther King hadn’t been born, the Civil Rights Movement wouldn’t have happened for another decade.” (They’re typically weak, presumption-laden arguments, but not inherently.)
Is the author criticizing a bad counterfactual argument—that God created the universe using the Big Bang knowing it would produce life, or even specifically us, perhaps?
Dunno ... need more context regarding the counterfactual in question. The criticism doesn’t fully cover it.
Either that or the author is just confused and it doesn’t make sense.